rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType > Class Template Reference

#include <rtkWarpProjectionStackToFourDImageFilter.h>

Inheritance diagram for rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >:

Collaboration diagram for rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >:

Public Types
using	CPUDVFInterpolatorType = CyclicDeformationImageFilter< DVFSequenceImageType, DVFImageType >
using	CPUVolumeSeriesType = typename itk::Image< typename VolumeSeriesType::PixelType, VolumeSeriesType::ImageDimension >
using	CudaCyclicDeformationImageFilterType = CPUDVFInterpolatorType
using	DVFImageType = itk::Image< VectorForDVF, VolumeSeriesType::ImageDimension - 1 >
using	DVFSequenceImageType = itk::Image< VectorForDVF, VolumeSeriesType::ImageDimension >
using	Pointer = itk::SmartPointer< Self >
using	Self = WarpProjectionStackToFourDImageFilter
using	SignalVectorType = std::vector< double >
using	Superclass = ProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >
using	VectorForDVF = itk::CovariantVector< typename VolumeSeriesType::ValueType, VolumeSeriesType::ImageDimension - 1 >
using	VolumeType = ProjectionStackType
using	WarpBackProjectionImageFilter = BackProjectionImageFilter< VolumeType, VolumeType >
Public Types inherited from rtk::ProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >
using	BackProjectionFilterType = rtk::BackProjectionImageFilter< VolumeType, VolumeType >
using	ConstantVolumeSeriesSourceType = rtk::ConstantImageSource< VolumeSeriesType >
using	ConstantVolumeSourceType = rtk::ConstantImageSource< VolumeType >
using	CPUVolumeSeriesType = typename itk::Image< typename VolumeSeriesType::PixelType, VolumeSeriesType::ImageDimension >
using	CudaConstantVolumeSeriesSourceType = ConstantVolumeSeriesSourceType
using	CudaConstantVolumeSourceType = ConstantVolumeSourceType
using	CudaSplatImageFilterType = SplatFilterType
using	ExtractFilterType = itk::ExtractImageFilter< ProjectionStackType, ProjectionStackType >
using	GeometryType = rtk::ThreeDCircularProjectionGeometry
using	Pointer = itk::SmartPointer< Self >
using	Self = ProjectionStackToFourDImageFilter
using	SplatFilterType = rtk::SplatWithKnownWeightsImageFilter< VolumeSeriesType, VolumeType >
using	Superclass = itk::ImageToImageFilter< VolumeSeriesType, VolumeSeriesType >
using	VolumeType = ProjectionStackType

Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother () const
void	SetBackProjectionFilter (const typename Superclass::BackProjectionFilterType::Pointer)
void	SetSignal (const std::vector< double > signal) override
virtual const char *	GetNameOfClass () const
void	SetDisplacementField (const DVFSequenceImageType *DisplacementField)
DVFSequenceImageType::ConstPointer	GetDisplacementField ()
virtual void	SetUseCudaCyclicDeformation (bool _arg)
virtual bool	GetUseCudaCyclicDeformation ()
Public Member Functions inherited from rtk::ProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >
virtual ::itk::LightObject::Pointer	CreateAnother () const
void	SetBackProjectionFilter (const typename BackProjectionFilterType::Pointer _arg)
virtual void	SetGeometry (const GeometryType *_arg)
void	SetInputVolumeSeries (const VolumeSeriesType *VolumeSeries)
VolumeSeriesType::ConstPointer	GetInputVolumeSeries ()
void	SetInputProjectionStack (const ProjectionStackType *Projection)
ProjectionStackType::ConstPointer	GetInputProjectionStack ()
virtual void	SetUseCudaSplat (bool _arg)
virtual bool	GetUseCudaSplat ()
virtual void	SetUseCudaSources (bool _arg)
virtual bool	GetUseCudaSources ()
virtual itk::Array2D< float >	GetWeights ()
virtual void	SetWeights (itk::Array2D< float > _arg)

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from rtk::ProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >
static Pointer	New ()

Protected Member Functions
void	GenerateData () override
void	GenerateOutputInformation () override
void	VerifyInputInformation () const override
	WarpProjectionStackToFourDImageFilter ()
	~WarpProjectionStackToFourDImageFilter () override=default
Protected Member Functions inherited from rtk::ProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >
void	GenerateData () override
void	GenerateInputRequestedRegion () override
void	GenerateOutputInformation () override
void	InitializeConstantSource ()
	ProjectionStackToFourDImageFilter ()
void	VerifyPreconditions () const override
	~ProjectionStackToFourDImageFilter () override=default

Protected Attributes
CPUDVFInterpolatorType::Pointer	m_DVFInterpolatorFilter
std::vector< double >	m_Signal
bool	m_UseCudaCyclicDeformation
Protected Attributes inherited from rtk::ProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >
BackProjectionFilterType::Pointer	m_BackProjectionFilter
ConstantVolumeSeriesSourceType::Pointer	m_ConstantVolumeSeriesSource
ConstantVolumeSourceType::Pointer	m_ConstantVolumeSource
ExtractFilterType::Pointer	m_ExtractFilter
GeometryType::ConstPointer	m_Geometry
std::vector< double >	m_Signal
SplatFilterType::Pointer	m_SplatFilter
bool	m_UseCudaSources
bool	m_UseCudaSplat
itk::Array2D< float >	m_Weights

Detailed Description

template<typename VolumeSeriesType, typename ProjectionStackType>
class rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >

Back projection part for motion compensated iterative 4D reconstruction.

This filter is similar to ProjectionStackToFourDImageFilter, except that it uses a motion-compensated backprojection. A 4D displacement vector field is therefore required, and its back projection filter cannot be changed.

Test:

rtkfourdconjugategradienttest.cxx

Author

Cyril Mory

Definition at line 85 of file rtkWarpProjectionStackToFourDImageFilter.h.

Member Typedef Documentation

CPUDVFInterpolatorType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::CPUDVFInterpolatorType = CyclicDeformationImageFilter<DVFSequenceImageType, DVFImageType>

Definition at line 123 of file rtkWarpProjectionStackToFourDImageFilter.h.

CPUVolumeSeriesType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::CPUVolumeSeriesType = typename itk::Image<typename VolumeSeriesType::PixelType, VolumeSeriesType::ImageDimension>

SFINAE type alias, depending on whether a CUDA image is used.

Definition at line 102 of file rtkWarpProjectionStackToFourDImageFilter.h.

CudaCyclicDeformationImageFilterType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::CudaCyclicDeformationImageFilterType = CPUDVFInterpolatorType

Definition at line 124 of file rtkWarpProjectionStackToFourDImageFilter.h.

DVFImageType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::DVFImageType = itk::Image<VectorForDVF, VolumeSeriesType::ImageDimension - 1>

Definition at line 121 of file rtkWarpProjectionStackToFourDImageFilter.h.

DVFSequenceImageType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::DVFSequenceImageType = itk::Image<VectorForDVF, VolumeSeriesType::ImageDimension>

Definition at line 120 of file rtkWarpProjectionStackToFourDImageFilter.h.

Pointer

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::Pointer = itk::SmartPointer<Self>

Definition at line 94 of file rtkWarpProjectionStackToFourDImageFilter.h.

Self

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::Self = WarpProjectionStackToFourDImageFilter

Standard class type alias.

Definition at line 92 of file rtkWarpProjectionStackToFourDImageFilter.h.

SignalVectorType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::SignalVectorType = std::vector<double>

Definition at line 138 of file rtkWarpProjectionStackToFourDImageFilter.h.

Superclass

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::Superclass = ProjectionStackToFourDImageFilter<VolumeSeriesType, ProjectionStackType>

Definition at line 93 of file rtkWarpProjectionStackToFourDImageFilter.h.

VectorForDVF

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::VectorForDVF = itk::CovariantVector<typename VolumeSeriesType::ValueType, VolumeSeriesType::ImageDimension - 1>

Definition at line 98 of file rtkWarpProjectionStackToFourDImageFilter.h.

VolumeType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::VolumeType = ProjectionStackType

Convenient type alias

Definition at line 97 of file rtkWarpProjectionStackToFourDImageFilter.h.

WarpBackProjectionImageFilter

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::WarpBackProjectionImageFilter = BackProjectionImageFilter<VolumeType, VolumeType>

Definition at line 122 of file rtkWarpProjectionStackToFourDImageFilter.h.

Constructor & Destructor Documentation

WarpProjectionStackToFourDImageFilter()

template<typename VolumeSeriesType , typename ProjectionStackType >

rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::WarpProjectionStackToFourDImageFilter ( )

protected

~WarpProjectionStackToFourDImageFilter()

template<typename VolumeSeriesType , typename ProjectionStackType >

rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::~WarpProjectionStackToFourDImageFilter ( )

overrideprotecteddefault

Member Function Documentation

CreateAnother()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual::itk::LightObject::Pointer rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::CreateAnother ( ) const

virtual

Reimplemented from itk::Object.

GenerateData()

template<typename VolumeSeriesType , typename ProjectionStackType >

void rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::GenerateData ( )

overrideprotectedvirtual

Does the real work.

Reimplemented from itk::ImageSource< TOutputImage >.

GenerateOutputInformation()

template<typename VolumeSeriesType , typename ProjectionStackType >

void rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::GenerateOutputInformation ( )

overrideprotectedvirtual

Reimplemented from itk::ProcessObject.

GetDisplacementField()

template<typename VolumeSeriesType , typename ProjectionStackType >

DVFSequenceImageType::ConstPointer rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::GetDisplacementField

(

)

The ND + time motion vector field

GetNameOfClass()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual const char* rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from rtk::ProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >.

GetUseCudaCyclicDeformation()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual bool rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::GetUseCudaCyclicDeformation ( )

virtual

Set and Get for the UseCudaCyclicDeformation variable

New()

template<typename VolumeSeriesType , typename ProjectionStackType >

static Pointer rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::New ( )

static

Method for creation through the object factory.

SetBackProjectionFilter()

template<typename VolumeSeriesType , typename ProjectionStackType >

void rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::SetBackProjectionFilter ( const typename Superclass::BackProjectionFilterType::Pointer  )

inline

The back projection filter cannot be set by the user

Definition at line 142 of file rtkWarpProjectionStackToFourDImageFilter.h.

SetDisplacementField()

template<typename VolumeSeriesType , typename ProjectionStackType >

void rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::SetDisplacementField

(

const DVFSequenceImageType *

DisplacementField

)

The ND + time motion vector field

SetSignal()

template<typename VolumeSeriesType , typename ProjectionStackType >

void rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::SetSignal ( const std::vector< double >  signal )

overridevirtual

Store the phase signal in a member variable

Reimplemented from rtk::ProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >.

SetUseCudaCyclicDeformation()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::SetUseCudaCyclicDeformation ( bool  _arg )

virtual

Set and Get for the UseCudaCyclicDeformation variable

VerifyInputInformation()

template<typename VolumeSeriesType , typename ProjectionStackType >

void rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::VerifyInputInformation ( ) const

inlineoverrideprotectedvirtual

The first two inputs should not be in the same space so there is nothing to verify.

Reimplemented from itk::ProcessObject.

Definition at line 176 of file rtkWarpProjectionStackToFourDImageFilter.h.

Member Data Documentation

m_DVFInterpolatorFilter

template<typename VolumeSeriesType , typename ProjectionStackType >

CPUDVFInterpolatorType::Pointer rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::m_DVFInterpolatorFilter

protected

Member pointers to the filters used internally (for convenience)

Definition at line 180 of file rtkWarpProjectionStackToFourDImageFilter.h.

m_Signal

template<typename VolumeSeriesType , typename ProjectionStackType >

std::vector<double> rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::m_Signal

protected

Definition at line 181 of file rtkWarpProjectionStackToFourDImageFilter.h.

m_UseCudaCyclicDeformation

template<typename VolumeSeriesType , typename ProjectionStackType >

bool rtk::WarpProjectionStackToFourDImageFilter< VolumeSeriesType, ProjectionStackType >::m_UseCudaCyclicDeformation

protected

Definition at line 182 of file rtkWarpProjectionStackToFourDImageFilter.h.

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The documentation for this class was generated from the following file:

• rtkWarpProjectionStackToFourDImageFilter.h