rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType > Class Template Reference

#include <rtkFourDROOSTERConeBeamReconstructionFilter.h>

Inheritance diagram for rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >:

Collaboration diagram for rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >:

Public Types
using	AddFilterType = itk::AddImageFilter< VolumeSeriesType, VolumeSeriesType >
using	AverageOutOfROIFilterType = AverageOutOfROIImageFilter< VolumeSeriesType, VolumeType >
using	BackProjectionType = typename Superclass::BackProjectionType
using	CovariantVectorForSpatialGradient = itk::CovariantVector< typename VolumeSeriesType::ValueType, VolumeSeriesType::ImageDimension - 1 >
using	CovariantVectorForTemporalGradient = itk::CovariantVector< typename VolumeSeriesType::ValueType, 1 >
using	CPUVolumeSeriesType = typename itk::Image< typename VolumeSeriesType::PixelType, VolumeSeriesType::ImageDimension >
using	DVFImageType = itk::Image< DVFVectorType, VolumeSeriesType::ImageDimension - 1 >
using	DVFSequenceImageType = itk::Image< DVFVectorType, VolumeSeriesType::ImageDimension >
using	DVFVectorType = CovariantVectorForSpatialGradient
using	ForwardProjectionType = typename Superclass::ForwardProjectionType
using	FourDCGFilterType = rtk::FourDConjugateGradientConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >
using	Pointer = itk::SmartPointer< Self >
using	ResampleFilterType = itk::ResampleImageFilter< VolumeType, VolumeType >
using	Self = FourDROOSTERConeBeamReconstructionFilter
using	SpatialGradientImageType = itk::Image< CovariantVectorForSpatialGradient, VolumeSeriesType::ImageDimension >
using	SpatialTVDenoisingFilterType = rtk::TotalVariationDenoiseSequenceImageFilter< VolumeSeriesType >
using	SpatialWaveletsDenoisingFilterType = rtk::DaubechiesWaveletsDenoiseSequenceImageFilter< VolumeSeriesType >
using	SubtractFilterType = itk::SubtractImageFilter< VolumeSeriesType, VolumeSeriesType >
using	Superclass = rtk::IterativeConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >
using	TemporalGradientImageType = itk::Image< CovariantVectorForTemporalGradient, VolumeSeriesType::ImageDimension >
using	TemporalL0DenoisingFilterType = rtk::LastDimensionL0GradientDenoisingImageFilter< VolumeSeriesType >
using	TemporalTVDenoisingFilterType = TotalVariationDenoisingBPDQImageFilter< VolumeSeriesType, TemporalGradientImageType >
using	ThresholdFilterType = itk::ThresholdImageFilter< VolumeSeriesType >
using	TNVDenoisingFilterType = rtk::TotalNuclearVariationDenoisingBPDQImageFilter< VolumeSeriesType, SpatialGradientImageType >
using	UnwarpSequenceFilterType = rtk::UnwarpSequenceImageFilter< VolumeSeriesType, DVFSequenceImageType, VolumeType, DVFImageType >
using	VolumeType = ProjectionStackType
using	WarpSequenceFilterType = rtk::WarpSequenceImageFilter< VolumeSeriesType, DVFSequenceImageType, VolumeType, DVFImageType >
Public Types inherited from rtk::IterativeConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >
using	BackProjectionFilterType = rtk::BackProjectionImageFilter< ProjectionStackType, VolumeType >
using	BackProjectionPointerType = typename BackProjectionFilterType::Pointer
enum	BackProjectionType
using	ConstPointer = itk::SmartPointer< const Self >
using	ForwardProjectionFilterType = rtk::ForwardProjectionImageFilter< VolumeType, ProjectionStackType >
using	ForwardProjectionPointerType = typename ForwardProjectionFilterType::Pointer
enum	ForwardProjectionType
using	Pointer = itk::SmartPointer< Self >
using	Self = IterativeConeBeamReconstructionFilter
using	Superclass = itk::ImageToImageFilter< VolumeSeriesType, VolumeSeriesType >
using	TClipImageType = itk::Image< double, VolumeType::ImageDimension >
using	VolumeType = ProjectionStackType

Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother () const
virtual int	GetCG_iterations ()
virtual bool	GetComputeInverseWarpingByConjugateGradient ()
virtual bool	GetCudaConjugateGradient ()
virtual float	GetGammaTNV ()
virtual float	GetGammaTVSpace ()
virtual float	GetGammaTVTime ()
virtual const ThreeDCircularProjectionGeometry *	GetGeometry () const
virtual int	GetL0_iterations ()
virtual float	GetLambdaL0Time ()
virtual int	GetMainLoop_iterations ()
virtual bool	GetPerformL0TemporalDenoising ()
virtual bool	GetPerformMotionMask ()
virtual bool	GetPerformPositivity ()
virtual bool	GetPerformTNVDenoising ()
virtual bool	GetPerformTVSpatialDenoising ()
virtual bool	GetPerformTVTemporalDenoising ()
virtual bool	GetPerformWarping ()
virtual bool	GetPerformWaveletsSpatialDenoising ()
virtual float	GetPhaseShift ()
virtual float	GetSoftThresholdWavelets ()
virtual int	GetTV_iterations ()
virtual bool	GetUseNearestNeighborInterpolationInWarping ()
virtual void	SetCG_iterations (int _arg)
virtual void	SetComputeInverseWarpingByConjugateGradient (bool _arg)
virtual void	SetCudaConjugateGradient (bool _arg)
virtual void	SetGammaTNV (float _arg)
virtual void	SetGammaTVSpace (float _arg)
virtual void	SetGammaTVTime (float _arg)
virtual void	SetGeometry (const ThreeDCircularProjectionGeometry *_arg)
virtual void	SetL0_iterations (int _arg)
virtual void	SetLambdaL0Time (float _arg)
virtual void	SetMainLoop_iterations (int _arg)
virtual void	SetPerformL0TemporalDenoising (bool _arg)
virtual void	SetPerformMotionMask (bool _arg)
virtual void	SetPerformPositivity (bool _arg)
virtual void	SetPerformTNVDenoising (bool _arg)
virtual void	SetPerformTVSpatialDenoising (bool _arg)
virtual void	SetPerformTVTemporalDenoising (bool _arg)
virtual void	SetPerformWarping (bool _arg)
virtual void	SetPerformWaveletsSpatialDenoising (bool _arg)
virtual void	SetPhaseShift (float _arg)
virtual void	SetSignal (const std::vector< double > signal)
virtual void	SetSoftThresholdWavelets (float _arg)
virtual void	SetTV_iterations (int _arg)
virtual void	SetUseNearestNeighborInterpolationInWarping (bool _arg)
virtual void	SetWeights (const itk::Array2D< float > _arg)
virtual const char *	GetNameOfClass () const
void	SetInputVolumeSeries (const VolumeSeriesType *VolumeSeries)
VolumeSeriesType::ConstPointer	GetInputVolumeSeries ()
void	SetInputProjectionStack (const ProjectionStackType *Projection)
ProjectionStackType::Pointer	GetInputProjectionStack ()
void	SetMotionMask (const VolumeType *mask)
VolumeType::Pointer	GetMotionMask ()
void	SetDisplacementField (const DVFSequenceImageType *DVFs)
void	SetInverseDisplacementField (const DVFSequenceImageType *DVFs)
DVFSequenceImageType::Pointer	GetDisplacementField ()
DVFSequenceImageType::Pointer	GetInverseDisplacementField ()
virtual void	SetDisableDisplacedDetectorFilter (bool _arg)
virtual bool	GetDisableDisplacedDetectorFilter ()
virtual void	SetUseCudaCyclicDeformation (bool _arg)
virtual bool	GetUseCudaCyclicDeformation ()
virtual unsigned int	GetNumberOfLevels ()
virtual void	SetNumberOfLevels (unsigned int _arg)
virtual unsigned int	GetOrder ()
virtual void	SetOrder (unsigned int _arg)
Public Member Functions inherited from rtk::IterativeConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >
virtual ::itk::LightObject::Pointer	CreateAnother () const
virtual void	SetForwardProjectionFilter (ForwardProjectionType fwtype)
ForwardProjectionType	GetForwardProjectionFilter ()
virtual void	SetBackProjectionFilter (BackProjectionType bptype)
BackProjectionType	GetBackProjectionFilter ()
void	SetAttenuationMap (const VolumeType *attenuationMap)
VolumeType::ConstPointer	GetAttenuationMap ()
void	SetInferiorClipImage (const TClipImageType *inferiorClipImage)
TClipImageType::ConstPointer	GetInferiorClipImage ()
void	SetSuperiorClipImage (const TClipImageType *superiorClipImage)
TClipImageType::ConstPointer	GetSuperiorClipImage ()
virtual double	GetSigmaZero ()
virtual void	SetSigmaZero (double _arg)
virtual double	GetAlphaPSF ()
virtual void	SetAlphaPSF (double _arg)
virtual double	GetStepSize () const
virtual void	SetStepSize (double _arg)

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from rtk::IterativeConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >
static Pointer	New ()

Protected Member Functions
	FourDROOSTERConeBeamReconstructionFilter ()
void	GenerateData () override
void	GenerateInputRequestedRegion () override
void	GenerateOutputInformation () override
void	VerifyInputInformation () const override
void	VerifyPreconditions () const override
	~FourDROOSTERConeBeamReconstructionFilter () override=default
Protected Member Functions inherited from rtk::IterativeConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >
virtual BackProjectionPointerType	InstantiateBackProjectionFilter (int bptype)
BackProjectionPointerType	InstantiateCudaBackProjection ()
BackProjectionPointerType	InstantiateCudaBackProjection ()
ForwardProjectionPointerType	InstantiateCudaForwardProjection ()
ForwardProjectionPointerType	InstantiateCudaForwardProjection ()
BackProjectionPointerType	InstantiateCudaRayCastBackProjection ()
BackProjectionPointerType	InstantiateCudaRayCastBackProjection ()
virtual ForwardProjectionPointerType	InstantiateForwardProjectionFilter (int fwtype)
BackProjectionPointerType	InstantiateJosephBackAttenuatedProjection ()
BackProjectionPointerType	InstantiateJosephBackAttenuatedProjection ()
ForwardProjectionPointerType	InstantiateJosephForwardAttenuatedProjection ()
ForwardProjectionPointerType	InstantiateJosephForwardAttenuatedProjection ()
BackProjectionPointerType	InstantiateZengBackProjection ()
BackProjectionPointerType	InstantiateZengBackProjection ()
ForwardProjectionPointerType	InstantiateZengForwardProjection ()
ForwardProjectionPointerType	InstantiateZengForwardProjection ()
	IterativeConeBeamReconstructionFilter ()
	~IterativeConeBeamReconstructionFilter () override=default

Protected Attributes
AddFilterType::Pointer	m_AddFilter
AverageOutOfROIFilterType::Pointer	m_AverageOutOfROIFilter
int	m_CG_iterations
bool	m_ComputeInverseWarpingByConjugateGradient
bool	m_CudaConjugateGradient
bool	m_DimensionsProcessedForTVSpace [VolumeSeriesType::ImageDimension]
bool	m_DimensionsProcessedForTVTime [VolumeSeriesType::ImageDimension]
bool	m_DisableDisplacedDetectorFilter
itk::ImageToImageFilter< VolumeSeriesType, VolumeSeriesType >::Pointer	m_DownstreamFilter
FourDCGFilterType::Pointer	m_FourDCGFilter
float	m_GammaTNV
float	m_GammaTVSpace
float	m_GammaTVTime
rtk::ThreeDCircularProjectionGeometry::ConstPointer	m_Geometry
WarpSequenceFilterType::Pointer	m_InverseWarp
int	m_L0_iterations
TemporalL0DenoisingFilterType::Pointer	m_L0DenoisingTime
float	m_LambdaL0Time
int	m_MainLoop_iterations
unsigned int	m_NumberOfLevels
unsigned int	m_Order
bool	m_PerformL0TemporalDenoising
bool	m_PerformMotionMask
bool	m_PerformPositivity
bool	m_PerformTNVDenoising
bool	m_PerformTVSpatialDenoising
bool	m_PerformTVTemporalDenoising
bool	m_PerformWarping
bool	m_PerformWaveletsSpatialDenoising
float	m_PhaseShift
ThresholdFilterType::Pointer	m_PositivityFilter
ResampleFilterType::Pointer	m_ResampleFilter
std::vector< double >	m_Signal
float	m_SoftThresholdWavelets
SubtractFilterType::Pointer	m_SubtractFilter
TNVDenoisingFilterType::Pointer	m_TNVDenoising
int	m_TV_iterations
SpatialTVDenoisingFilterType::Pointer	m_TVDenoisingSpace
TemporalTVDenoisingFilterType::Pointer	m_TVDenoisingTime
UnwarpSequenceFilterType::Pointer	m_Unwarp
bool	m_UseCudaCyclicDeformation
bool	m_UseNearestNeighborInterpolationInWarping
WarpSequenceFilterType::Pointer	m_Warp
SpatialWaveletsDenoisingFilterType::Pointer	m_WaveletsDenoisingSpace
Protected Attributes inherited from rtk::IterativeConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >
double	m_AlphaPSF
BackProjectionType	m_CurrentBackProjectionConfiguration
ForwardProjectionType	m_CurrentForwardProjectionConfiguration
std::default_random_engine	m_DefaultRandomEngine
double	m_SigmaZero
double	m_StepSize

Additional Inherited Members
Protected Types inherited from rtk::IterativeConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >
using	CPUImageType = typename itk::Image< typename ProjectionStackType::PixelType, ProjectionStackType::ImageDimension >
using	EnableCudaScalarAndVectorType = typename std::enable_if< !std::is_same< CPUImageType, ImageType >::value &&std::is_same< typename itk::PixelTraits< typename ImageType::PixelType >::ValueType, float >::value &&(itk::PixelTraits< typename ImageType::PixelType >::Dimension==1||itk::PixelTraits< typename ImageType::PixelType >::Dimension==2||itk::PixelTraits< typename ImageType::PixelType >::Dimension==3)>::type
using	DisableCudaScalarAndVectorType = typename std::enable_if< std::is_same< CPUImageType, ImageType >::value||!std::is_same< typename itk::PixelTraits< typename ImageType::PixelType >::ValueType, float >::value||(itk::PixelTraits< typename ImageType::PixelType >::Dimension !=1 &&itk::PixelTraits< typename ImageType::PixelType >::Dimension !=2 &&itk::PixelTraits< typename ImageType::PixelType >::Dimension !=3)>::type
using	EnableCudaScalarType = typename std::enable_if< !std::is_same< CPUImageType, ImageType >::value &&std::is_same< typename itk::PixelTraits< typename ImageType::PixelType >::ValueType, float >::value &&itk::PixelTraits< typename ImageType::PixelType >::Dimension==1 >::type
using	DisableCudaScalarType = typename std::enable_if< std::is_same< CPUImageType, ImageType >::value||!std::is_same< typename itk::PixelTraits< typename ImageType::PixelType >::ValueType, float >::value||itk::PixelTraits< typename ImageType::PixelType >::Dimension !=1 >::type
using	EnableVectorType = typename std::enable_if< itk::PixelTraits< typename ImageType::PixelType >::Dimension !=1 >::type
using	DisableVectorType = typename std::enable_if< itk::PixelTraits< typename ImageType::PixelType >::Dimension==1 >::type

Detailed Description

template<typename VolumeSeriesType, typename ProjectionStackType>
class rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >

Implements 4D RecOnstructiOn using Spatial and TEmporal Regularization (short 4D ROOSTER)

See the reference paper: "Cardiac C-arm computed tomography using a 3D + time ROI reconstruction method with spatial and temporal regularization" by Mory et al.

4D ROOSTER reconstruction consists in performing 4D Conjugate Gradient reconstruction, then applying several regularization steps :

• Replacing all negative values by zero
• Averaging along time where no movement is expected
• Applying total variation denoising in space
• Applying wavelets denoising in space
• Applying total variation denoising in time
• Applying gradient's L0 norm denoising in time
• Applying total nuclear variation denoising and starting over as many times as the number of main loop iterations desired.

If both the displacement vector fields to a reference phase and from a reference phase are provided, 4D ROOSTER performs the denoising in time the following way:

• each 3D volume of the sequence is warped to the reference phase using the first DVF
• denoising in time is applied on the warped sequence
• the difference sequence between the warped-then-denoised sequence and the warped sequence is computed
• that difference sequence is warped from the reference phase using the second DVF, and added to the output of spatial denoising

If only the displacement vector field to a reference phase is provided, 4D ROOSTER performs total variation denoising in time the following way:

• each 3D volume of the sequence is warped to the reference phase using the first DVF
• denoising in time is applied on the warped sequence
• the warped-then-denoised sequence is warped from the reference phase by an iterative procedure based on conjugate gradient. This significantly increases computation time.

Test:

rtkfourdroostertest.cxx

Author

Cyril Mory

Definition at line 207 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

Member Typedef Documentation

AddFilterType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::AddFilterType = itk::AddImageFilter<VolumeSeriesType, VolumeSeriesType>

Definition at line 314 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

AverageOutOfROIFilterType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::AverageOutOfROIFilterType = AverageOutOfROIImageFilter<VolumeSeriesType, VolumeType>

Definition at line 255 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

BackProjectionType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::BackProjectionType = typename Superclass::BackProjectionType

Definition at line 320 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

CovariantVectorForSpatialGradient

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::CovariantVectorForSpatialGradient = itk::CovariantVector<typename VolumeSeriesType::ValueType, VolumeSeriesType::ImageDimension - 1>

Definition at line 219 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

CovariantVectorForTemporalGradient

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::CovariantVectorForTemporalGradient = itk::CovariantVector<typename VolumeSeriesType::ValueType, 1>

Definition at line 220 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

CPUVolumeSeriesType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::CPUVolumeSeriesType = typename itk::Image<typename VolumeSeriesType::PixelType, VolumeSeriesType::ImageDimension>

SFINAE type alias, depending on whether a CUDA image is used.

Definition at line 225 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

DVFImageType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::DVFImageType = itk::Image<DVFVectorType, VolumeSeriesType::ImageDimension - 1>

Definition at line 254 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

DVFSequenceImageType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::DVFSequenceImageType = itk::Image<DVFVectorType, VolumeSeriesType::ImageDimension>

Definition at line 253 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

DVFVectorType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::DVFVectorType = CovariantVectorForSpatialGradient

Definition at line 221 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

ForwardProjectionType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::ForwardProjectionType = typename Superclass::ForwardProjectionType

Definition at line 319 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

FourDCGFilterType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::FourDCGFilterType = rtk::FourDConjugateGradientConeBeamReconstructionFilter<VolumeSeriesType, ProjectionStackType>

Definition at line 304 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

Pointer

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::Pointer = itk::SmartPointer<Self>

Definition at line 216 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

ResampleFilterType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::ResampleFilterType = itk::ResampleImageFilter<VolumeType, VolumeType>

Definition at line 306 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

Self

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::Self = FourDROOSTERConeBeamReconstructionFilter

Standard class type alias.

Definition at line 214 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

SpatialGradientImageType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SpatialGradientImageType = itk::Image<CovariantVectorForSpatialGradient, VolumeSeriesType::ImageDimension>

Definition at line 251 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

SpatialTVDenoisingFilterType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SpatialTVDenoisingFilterType = rtk::TotalVariationDenoiseSequenceImageFilter<VolumeSeriesType>

Definition at line 307 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

SpatialWaveletsDenoisingFilterType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SpatialWaveletsDenoisingFilterType = rtk::DaubechiesWaveletsDenoiseSequenceImageFilter<VolumeSeriesType>

Definition at line 308 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

SubtractFilterType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SubtractFilterType = itk::SubtractImageFilter<VolumeSeriesType, VolumeSeriesType>

Definition at line 313 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

Superclass

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::Superclass = rtk::IterativeConeBeamReconstructionFilter<VolumeSeriesType, ProjectionStackType>

Definition at line 215 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

TemporalGradientImageType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::TemporalGradientImageType = itk::Image<CovariantVectorForTemporalGradient, VolumeSeriesType::ImageDimension>

Definition at line 252 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

TemporalL0DenoisingFilterType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::TemporalL0DenoisingFilterType = rtk::LastDimensionL0GradientDenoisingImageFilter<VolumeSeriesType>

Definition at line 315 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

TemporalTVDenoisingFilterType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::TemporalTVDenoisingFilterType = TotalVariationDenoisingBPDQImageFilter<VolumeSeriesType, TemporalGradientImageType>

Definition at line 257 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

ThresholdFilterType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::ThresholdFilterType = itk::ThresholdImageFilter<VolumeSeriesType>

Definition at line 305 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

TNVDenoisingFilterType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::TNVDenoisingFilterType = rtk::TotalNuclearVariationDenoisingBPDQImageFilter<VolumeSeriesType, SpatialGradientImageType>

Definition at line 317 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

UnwarpSequenceFilterType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::UnwarpSequenceFilterType = rtk::UnwarpSequenceImageFilter<VolumeSeriesType, DVFSequenceImageType, VolumeType, DVFImageType>

Definition at line 312 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

VolumeType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::VolumeType = ProjectionStackType

Definition at line 217 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

WarpSequenceFilterType

template<typename VolumeSeriesType , typename ProjectionStackType >

using rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::WarpSequenceFilterType = rtk::WarpSequenceImageFilter<VolumeSeriesType, DVFSequenceImageType, VolumeType, DVFImageType>

Definition at line 310 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

Constructor & Destructor Documentation

FourDROOSTERConeBeamReconstructionFilter()

template<typename VolumeSeriesType , typename ProjectionStackType >

rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::FourDROOSTERConeBeamReconstructionFilter ( )

protected

~FourDROOSTERConeBeamReconstructionFilter()

template<typename VolumeSeriesType , typename ProjectionStackType >

rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::~FourDROOSTERConeBeamReconstructionFilter ( )

overrideprotecteddefault

Member Function Documentation

CreateAnother()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual::itk::LightObject::Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::CreateAnother ( ) const

virtual

Reimplemented from itk::Object.

Reimplemented in rtk::MotionCompensatedFourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >.

GenerateData()

template<typename VolumeSeriesType , typename ProjectionStackType >

void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GenerateData ( )

overrideprotectedvirtual

Does the real work.

Reimplemented from itk::ImageSource< TOutputImage >.

Reimplemented in rtk::MotionCompensatedFourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >.

GenerateInputRequestedRegion()

template<typename VolumeSeriesType , typename ProjectionStackType >

void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GenerateInputRequestedRegion ( )

overrideprotectedvirtual

Reimplemented from itk::ProcessObject.

Reimplemented in rtk::MotionCompensatedFourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >.

GenerateOutputInformation()

template<typename VolumeSeriesType , typename ProjectionStackType >

void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GenerateOutputInformation ( )

overrideprotectedvirtual

Reimplemented from itk::ProcessObject.

Reimplemented in rtk::MotionCompensatedFourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >.

GetCG_iterations()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual int rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetCG_iterations ( )

virtual

GetComputeInverseWarpingByConjugateGradient()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetComputeInverseWarpingByConjugateGradient ( )

virtual

GetCudaConjugateGradient()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetCudaConjugateGradient ( )

virtual

GetDisableDisplacedDetectorFilter()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetDisableDisplacedDetectorFilter ( )

virtual

Set / Get whether the displaced detector filter should be disabled

GetDisplacementField()

template<typename VolumeSeriesType , typename ProjectionStackType >

DVFSequenceImageType::Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetDisplacementField

(

)

The motion vector fields used to warp the sequence before and after TV denoising along time

GetGammaTNV()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual float rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetGammaTNV ( )

virtual

GetGammaTVSpace()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual float rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetGammaTVSpace ( )

virtual

GetGammaTVTime()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual float rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetGammaTVTime ( )

virtual

GetGeometry()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual const ThreeDCircularProjectionGeometry* rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetGeometry ( ) const

virtual

GetInputProjectionStack()

template<typename VolumeSeriesType , typename ProjectionStackType >

ProjectionStackType::Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetInputProjectionStack

(

)

The stack of measured projections

GetInputVolumeSeries()

template<typename VolumeSeriesType , typename ProjectionStackType >

VolumeSeriesType::ConstPointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetInputVolumeSeries

(

)

The 4D image to be updated.

GetInverseDisplacementField()

template<typename VolumeSeriesType , typename ProjectionStackType >

DVFSequenceImageType::Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetInverseDisplacementField

(

)

The motion vector fields used to warp the sequence before and after TV denoising along time

GetL0_iterations()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual int rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetL0_iterations ( )

virtual

GetLambdaL0Time()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual float rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetLambdaL0Time ( )

virtual

GetMainLoop_iterations()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual int rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetMainLoop_iterations ( )

virtual

GetMotionMask()

template<typename VolumeSeriesType , typename ProjectionStackType >

VolumeType::Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetMotionMask

(

)

The region of interest outside of which all movement is removed

GetNameOfClass()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual const char* rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from rtk::IterativeConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >.

Reimplemented in rtk::MotionCompensatedFourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >.

GetNumberOfLevels()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual unsigned int rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetNumberOfLevels ( )

virtual

Set the number of levels of the wavelets decomposition

GetOrder()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual unsigned int rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetOrder ( )

virtual

Sets the order of the Daubechies wavelet used to deconstruct/reconstruct the image pyramid

GetPerformL0TemporalDenoising()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetPerformL0TemporalDenoising ( )

virtual

GetPerformMotionMask()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetPerformMotionMask ( )

virtual

GetPerformPositivity()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetPerformPositivity ( )

virtual

GetPerformTNVDenoising()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetPerformTNVDenoising ( )

virtual

GetPerformTVSpatialDenoising()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetPerformTVSpatialDenoising ( )

virtual

GetPerformTVTemporalDenoising()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetPerformTVTemporalDenoising ( )

virtual

GetPerformWarping()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetPerformWarping ( )

virtual

GetPerformWaveletsSpatialDenoising()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetPerformWaveletsSpatialDenoising ( )

virtual

GetPhaseShift()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual float rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetPhaseShift ( )

virtual

GetSoftThresholdWavelets()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual float rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetSoftThresholdWavelets ( )

virtual

GetTV_iterations()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual int rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetTV_iterations ( )

virtual

GetUseCudaCyclicDeformation()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetUseCudaCyclicDeformation ( )

virtual

Set and Get for the UseCudaCyclicDeformation variable

GetUseNearestNeighborInterpolationInWarping()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::GetUseNearestNeighborInterpolationInWarping ( )

virtual

New()

template<typename VolumeSeriesType , typename ProjectionStackType >

static Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::New ( )

static

Method for creation through the object factory.

SetCG_iterations()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetCG_iterations ( int  _arg )

virtual

SetComputeInverseWarpingByConjugateGradient()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetComputeInverseWarpingByConjugateGradient ( bool  _arg )

virtual

SetCudaConjugateGradient()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetCudaConjugateGradient ( bool  _arg )

virtual

SetDisableDisplacedDetectorFilter()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetDisableDisplacedDetectorFilter ( bool  _arg )

virtual

Set / Get whether the displaced detector filter should be disabled

SetDisplacementField()

template<typename VolumeSeriesType , typename ProjectionStackType >

void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetDisplacementField

(

const DVFSequenceImageType *

DVFs

)

The motion vector fields used to warp the sequence before and after TV denoising along time

SetGammaTNV()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetGammaTNV ( float  _arg )

virtual

SetGammaTVSpace()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetGammaTVSpace ( float  _arg )

virtual

SetGammaTVTime()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetGammaTVTime ( float  _arg )

virtual

SetGeometry()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetGeometry ( const ThreeDCircularProjectionGeometry *  _arg )

virtual

SetInputProjectionStack()

template<typename VolumeSeriesType , typename ProjectionStackType >

void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetInputProjectionStack

(

const ProjectionStackType *

Projection

)

The stack of measured projections

SetInputVolumeSeries()

template<typename VolumeSeriesType , typename ProjectionStackType >

void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetInputVolumeSeries

(

const VolumeSeriesType *

VolumeSeries

)

The 4D image to be updated.

SetInverseDisplacementField()

template<typename VolumeSeriesType , typename ProjectionStackType >

void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetInverseDisplacementField

(

const DVFSequenceImageType *

DVFs

)

The motion vector fields used to warp the sequence before and after TV denoising along time

SetL0_iterations()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetL0_iterations ( int  _arg )

virtual

SetLambdaL0Time()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetLambdaL0Time ( float  _arg )

virtual

SetMainLoop_iterations()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetMainLoop_iterations ( int  _arg )

virtual

SetMotionMask()

template<typename VolumeSeriesType , typename ProjectionStackType >

void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetMotionMask

(

const VolumeType *

mask

)

The region of interest outside of which all movement is removed

SetNumberOfLevels()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetNumberOfLevels ( unsigned int  _arg )

virtual

Set the number of levels of the wavelets decomposition

SetOrder()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetOrder ( unsigned int  _arg )

virtual

Sets the order of the Daubechies wavelet used to deconstruct/reconstruct the image pyramid

SetPerformL0TemporalDenoising()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetPerformL0TemporalDenoising ( bool  _arg )

virtual

SetPerformMotionMask()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetPerformMotionMask ( bool  _arg )

virtual

SetPerformPositivity()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetPerformPositivity ( bool  _arg )

virtual

SetPerformTNVDenoising()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetPerformTNVDenoising ( bool  _arg )

virtual

SetPerformTVSpatialDenoising()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetPerformTVSpatialDenoising ( bool  _arg )

virtual

SetPerformTVTemporalDenoising()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetPerformTVTemporalDenoising ( bool  _arg )

virtual

SetPerformWarping()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetPerformWarping ( bool  _arg )

virtual

SetPerformWaveletsSpatialDenoising()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetPerformWaveletsSpatialDenoising ( bool  _arg )

virtual

SetPhaseShift()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetPhaseShift ( float  _arg )

virtual

SetSignal()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetSignal ( const std::vector< double >  signal )

virtual

Store the phase signal in a member variable

Reimplemented in rtk::MotionCompensatedFourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >.

SetSoftThresholdWavelets()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetSoftThresholdWavelets ( float  _arg )

virtual

SetTV_iterations()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetTV_iterations ( int  _arg )

virtual

SetUseCudaCyclicDeformation()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetUseCudaCyclicDeformation ( bool  _arg )

virtual

Set and Get for the UseCudaCyclicDeformation variable

SetUseNearestNeighborInterpolationInWarping()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetUseNearestNeighborInterpolationInWarping ( bool  _arg )

virtual

SetWeights()

template<typename VolumeSeriesType , typename ProjectionStackType >

virtual void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::SetWeights ( const itk::Array2D< float >  _arg )

virtual

Pass the interpolation weights to SingleProjectionToFourDFilter

VerifyInputInformation()

template<typename VolumeSeriesType , typename ProjectionStackType >

void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::VerifyInputInformation ( ) const

inlineoverrideprotectedvirtual

Reimplemented from itk::ProcessObject.

Definition at line 423 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

VerifyPreconditions()

template<typename VolumeSeriesType , typename ProjectionStackType >

void rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::VerifyPreconditions ( ) const

overrideprotectedvirtual

Checks that inputs are correctly set.

Reimplemented from itk::ProcessObject.

Member Data Documentation

m_AddFilter

template<typename VolumeSeriesType , typename ProjectionStackType >

AddFilterType::Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_AddFilter

protected

Definition at line 438 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_AverageOutOfROIFilter

template<typename VolumeSeriesType , typename ProjectionStackType >

AverageOutOfROIFilterType::Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_AverageOutOfROIFilter

protected

Definition at line 430 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_CG_iterations

template<typename VolumeSeriesType , typename ProjectionStackType >

int rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_CG_iterations

protected

Definition at line 478 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_ComputeInverseWarpingByConjugateGradient

template<typename VolumeSeriesType , typename ProjectionStackType >

bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_ComputeInverseWarpingByConjugateGradient

protected

Definition at line 454 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_CudaConjugateGradient

template<typename VolumeSeriesType , typename ProjectionStackType >

bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_CudaConjugateGradient

protected

Definition at line 456 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_DimensionsProcessedForTVSpace

template<typename VolumeSeriesType , typename ProjectionStackType >

bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_DimensionsProcessedForTVSpace[VolumeSeriesType::ImageDimension]

protected

Definition at line 467 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_DimensionsProcessedForTVTime

template<typename VolumeSeriesType , typename ProjectionStackType >

bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_DimensionsProcessedForTVTime[VolumeSeriesType::ImageDimension]

protected

Definition at line 468 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_DisableDisplacedDetectorFilter

template<typename VolumeSeriesType , typename ProjectionStackType >

bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_DisableDisplacedDetectorFilter

protected

Definition at line 458 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_DownstreamFilter

template<typename VolumeSeriesType , typename ProjectionStackType >

itk::ImageToImageFilter<VolumeSeriesType, VolumeSeriesType>::Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_DownstreamFilter

protected

Definition at line 470 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_FourDCGFilter

template<typename VolumeSeriesType , typename ProjectionStackType >

FourDCGFilterType::Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_FourDCGFilter

protected

Member pointers to the filters used internally (for convenience)

Definition at line 427 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_GammaTNV

template<typename VolumeSeriesType , typename ProjectionStackType >

float rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_GammaTNV

protected

Definition at line 463 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_GammaTVSpace

template<typename VolumeSeriesType , typename ProjectionStackType >

float rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_GammaTVSpace

protected

Definition at line 461 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_GammaTVTime

template<typename VolumeSeriesType , typename ProjectionStackType >

float rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_GammaTVTime

protected

Definition at line 462 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_Geometry

template<typename VolumeSeriesType , typename ProjectionStackType >

rtk::ThreeDCircularProjectionGeometry::ConstPointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_Geometry

protected

Definition at line 483 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_InverseWarp

template<typename VolumeSeriesType , typename ProjectionStackType >

WarpSequenceFilterType::Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_InverseWarp

protected

Definition at line 436 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_L0_iterations

template<typename VolumeSeriesType , typename ProjectionStackType >

int rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_L0_iterations

protected

Definition at line 480 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_L0DenoisingTime

template<typename VolumeSeriesType , typename ProjectionStackType >

TemporalL0DenoisingFilterType::Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_L0DenoisingTime

protected

Definition at line 439 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_LambdaL0Time

template<typename VolumeSeriesType , typename ProjectionStackType >

float rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_LambdaL0Time

protected

Definition at line 464 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_MainLoop_iterations

template<typename VolumeSeriesType , typename ProjectionStackType >

int rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_MainLoop_iterations

protected

Definition at line 477 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_NumberOfLevels

template<typename VolumeSeriesType , typename ProjectionStackType >

unsigned int rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_NumberOfLevels

protected

Definition at line 474 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_Order

template<typename VolumeSeriesType , typename ProjectionStackType >

unsigned int rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_Order

protected

Information for the wavelets denoising filter

Definition at line 473 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_PerformL0TemporalDenoising

template<typename VolumeSeriesType , typename ProjectionStackType >

bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_PerformL0TemporalDenoising

protected

Definition at line 452 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_PerformMotionMask

template<typename VolumeSeriesType , typename ProjectionStackType >

bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_PerformMotionMask

protected

Definition at line 447 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_PerformPositivity

template<typename VolumeSeriesType , typename ProjectionStackType >

bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_PerformPositivity

protected

Definition at line 446 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_PerformTNVDenoising

template<typename VolumeSeriesType , typename ProjectionStackType >

bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_PerformTNVDenoising

protected

Definition at line 453 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_PerformTVSpatialDenoising

template<typename VolumeSeriesType , typename ProjectionStackType >

bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_PerformTVSpatialDenoising

protected

Definition at line 448 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_PerformTVTemporalDenoising

template<typename VolumeSeriesType , typename ProjectionStackType >

bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_PerformTVTemporalDenoising

protected

Definition at line 451 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_PerformWarping

template<typename VolumeSeriesType , typename ProjectionStackType >

bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_PerformWarping

protected

Definition at line 450 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_PerformWaveletsSpatialDenoising

template<typename VolumeSeriesType , typename ProjectionStackType >

bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_PerformWaveletsSpatialDenoising

protected

Definition at line 449 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_PhaseShift

template<typename VolumeSeriesType , typename ProjectionStackType >

float rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_PhaseShift

protected

Definition at line 466 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_PositivityFilter

template<typename VolumeSeriesType , typename ProjectionStackType >

ThresholdFilterType::Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_PositivityFilter

protected

Definition at line 428 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_ResampleFilter

template<typename VolumeSeriesType , typename ProjectionStackType >

ResampleFilterType::Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_ResampleFilter

protected

Definition at line 429 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_Signal

template<typename VolumeSeriesType , typename ProjectionStackType >

std::vector<double> rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_Signal

protected

Definition at line 486 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_SoftThresholdWavelets

template<typename VolumeSeriesType , typename ProjectionStackType >

float rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_SoftThresholdWavelets

protected

Definition at line 465 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_SubtractFilter

template<typename VolumeSeriesType , typename ProjectionStackType >

SubtractFilterType::Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_SubtractFilter

protected

Definition at line 437 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_TNVDenoising

template<typename VolumeSeriesType , typename ProjectionStackType >

TNVDenoisingFilterType::Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_TNVDenoising

protected

Definition at line 440 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_TV_iterations

template<typename VolumeSeriesType , typename ProjectionStackType >

int rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_TV_iterations

protected

Definition at line 479 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_TVDenoisingSpace

template<typename VolumeSeriesType , typename ProjectionStackType >

SpatialTVDenoisingFilterType::Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_TVDenoisingSpace

protected

Definition at line 431 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_TVDenoisingTime

template<typename VolumeSeriesType , typename ProjectionStackType >

TemporalTVDenoisingFilterType::Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_TVDenoisingTime

protected

Definition at line 434 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_Unwarp

template<typename VolumeSeriesType , typename ProjectionStackType >

UnwarpSequenceFilterType::Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_Unwarp

protected

Definition at line 435 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_UseCudaCyclicDeformation

template<typename VolumeSeriesType , typename ProjectionStackType >

bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_UseCudaCyclicDeformation

protected

Definition at line 457 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_UseNearestNeighborInterpolationInWarping

template<typename VolumeSeriesType , typename ProjectionStackType >

bool rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_UseNearestNeighborInterpolationInWarping

protected

Definition at line 455 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_Warp

template<typename VolumeSeriesType , typename ProjectionStackType >

WarpSequenceFilterType::Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_Warp

protected

Definition at line 433 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

m_WaveletsDenoisingSpace

template<typename VolumeSeriesType , typename ProjectionStackType >

SpatialWaveletsDenoisingFilterType::Pointer rtk::FourDROOSTERConeBeamReconstructionFilter< VolumeSeriesType, ProjectionStackType >::m_WaveletsDenoisingSpace

protected

Definition at line 432 of file rtkFourDROOSTERConeBeamReconstructionFilter.h.

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The documentation for this class was generated from the following file:

• rtkFourDROOSTERConeBeamReconstructionFilter.h